Package: ccid 1.0.0

ccid: Cross-Covariance Isolate Detect: a New Change-Point Method for Estimating Dynamic Functional Connectivity

Provides efficient implementation of the Cross-Covariance Isolate Detect (CCID) methodology for the estimation of the number and location of multiple change-points in the second-order (cross-covariance or network) structure of multivariate, possibly high-dimensional time series. The method is motivated by the detection of change points in functional connectivity networks for functional magnetic resonance imaging (fMRI), electroencephalography (EEG), magentoencephalography (MEG) and electrocorticography (ECoG) data. The main routines in the package have been extensively tested on fMRI data. For details on the CCID methodology, please see Anastasiou et al (2020).

Authors:Andreas Anastasiou [aut, cre], Ivor Cribben [aut], Piotr Fryzlewicz [aut]

ccid_1.0.0.tar.gz
ccid_1.0.0.zip(r-4.7)ccid_1.0.0.zip(r-4.6)ccid_1.0.0.zip(r-4.5)
ccid_1.0.0.tgz(r-4.6-any)ccid_1.0.0.tgz(r-4.5-any)
ccid_1.0.0.tar.gz(r-4.7-any)ccid_1.0.0.tar.gz(r-4.6-any)
ccid_1.0.0.tgz(r-4.6-emscripten)
manual.pdf |manual.html
card.svg |card.png
ccid/json (API)

# Install 'ccid' in R:
install.packages('ccid', repos = c('https://anastasiou-andreas.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/anastasiou-andreas/ccid/issues

On CRAN:

Conda:

2.70 score 2 scripts 194 downloads 4 exports 14 dependencies

Last updated from:d9665a4c4a. Checks:7 NOTE, 2 OK. Indexed: yes.

TargetResultTimeFilesSyslog
linux-devel-x86_64NOTE113
source / vignettesOK146
linux-release-x86_64NOTE129
macos-release-arm64NOTE150
macos-oldrel-arm64NOTE154
windows-develNOTE77
windows-releaseNOTE69
windows-oldrelNOTE68
wasm-releaseOK94

Exports:detect.icdetect.thmatch.cpt.tspreaverage

Dependencies:codetoolscorpcordoParallelfdrtoolforeachgdataGeneNetgtoolshdbinsegIDetectiteratorslongitudinalRcppRcppArmadillo